Proceedings of the Fifth Mexican International Conference in Computer Science, 2004. ENC 2004.
Download PDF

Abstract

A heuristic algorithm for the DNA sequence assembly problem is presented. Its sequential implementation is described as well as its parallelization method. A computational experiment shows how the parallel algorithm speed depends on a number of processes. Tests on real data from experiments with the SARS coronavirus are also discussed, and the outcome of our algorithm appears to be biologically correct.

Related Articles